Python class to represent a set of GWAS Catalog Association. For more information, see "GWAS CATALOG API Guide"
# get Association by study_id
from pandasgwas.get_associations import get_associations
associations = get_associations(study_id='GCST000854')
| Attributes: |
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associations
–
pandas.DataFrame. A DataFrame to represent all queried Associations from GWAS Catalog REST API
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loci
–
pandas.DataFrame. A DataFrame to represent column loci from associations
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strongest_risk_alleles
–
pandas.DataFrame. A DataFrame to represent column strongest_risk_alleles from loci
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author_reported_genes
–
pandas.DataFrame. A DataFrame to represent column author_reported_genes from loci
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entrez_gene_ids
–
pandas.DataFrame. A DataFrame to represent column entrez_gene_ids from author_reported_genes
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ensembl_gene_ids
–
pandas.DataFrame. A DataFrame to represent column entrez_gene_ids from author_reported_genes
|