Python class to represent a set of GWAS Catalog Single Nucleotide Polymorphism. For more information, see "GWAS CATALOG API Guide"
# get Single Nucleotide Polymorphism by study_id
from pandasgwas.get_variants import get_variants
snps = get_variants(study_id='GCST000854')
| Attributes: |
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single_nucleotide_polymorphisms
–
pandas.DataFrame. A DataFrame to represent all queried Single Nucleotide Polymorphisms from GWAS Catalog REST API
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locations
–
pandas.DataFrame. A DataFrame to represent column locations from single_nucleotide_polymorphisms
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genomic_contexts
–
pandas.DataFrame. A DataFrame to represent column genomicContexts from single_nucleotide_polymorphisms
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ensembl_gene_ids
–
pandas.DataFrame. A DataFrame to represent column gene.ensemblGeneIds from genomic_contexts
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entrez_gene_ids
–
pandas.DataFrame. A DataFrame to represent column gene.entrezGeneIds from genomic_contexts
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